More than meets the eye; what is ‘seeing’?

Love in a time of Prozac; how did our emotions evolve?

What is language?

Many animals produce song, but for one species, the vocal repertoire stands out as remarkable. Their calls, specific to their social group, combine a basic set of sounds into endlessly varied combinations. These are enhanced by altering rhythm, pitch and stress, and are complimented by gestures, sometimes using the entire body.

These calls transmit sophisticated information. The meaning of each compound sound depends upon its position within their song-like phrases. Each phrase is complex, and meaning is added to when phrases are combined.

Making these vocal calls requires the coordination in sequence of some 40 muscles in the mouth and throat. But there is one snag; the vocal anatomy which allows these animals to articulate their calls also predisposes them to a high risk of choking.

And to observe one of these extraordinary creatures, look in a mirror. Meet Homo sapiens; sound-smith, toolmaker, storyteller.


The possession of speech is the grand distinctive character of man

[Thomas Huxley, 1871]

The NASA ‘Voyager 1’ space probe, launched in 1977, is now approaching the outer reaches of our solar system.  On board, a gramophone record provides a selection of natural and man-made sounds from earth.  These include music from different genres and greetings to the Universe in 55 of earth’s different languages.  The cover, shown here, indicates how to play the recording (Image: Wikimedia Commons).  To listen to the earth sounds sent into space, click here.

The NASA Voyager 1 space probe, launched in 1977, is now approaching the outer reaches of our solar system. On board, a gramophone record provides a selection of natural and man-made sounds from earth. These include mus... moreic from different genres and greetings to the Universe in 55 of earth’s different languages. The cover, shown here, indicates how to play the recording (Image: Wikimedia Commons). To listen to the earth sounds sent into space, click here.

We enjoy a unique legacy; language. This is paradoxical; the physical attributes that together make our speech possible are not exclusive to humans, although evolving our particular combination of them is indeed novel, as are its consequences. Our habit of communicating by speaking has re-structured our entire ecology.

Speech sets us apart, defines how we understand ourselves, and codes our behaviours and habits. Through language we cooperate, adapt to our circumstances, share and use knowledge, coordinate our behaviour with others, align our actions with our intentions, and reach outacross the boundaries of time and space.

“We are more alike, my friends, than we are unalike” (Maya Angelou)

Language then, appears to define who we are. This opens up many questions.

How can we define language?

Male zebra finches (Taeniopygia guttata) learn their courtship song in stages. During the ‘sensory phase’ juvenile birds listens to birds in their environment. In the sensorimotor phase, it starts to ‘babble’; attempting copied versions of the song (the ‘sub song). Later the bird begins to generate subtle variability within highly structured syllables (as shown on the sonograph – letters refer to sound syllables). At sexual maturity the song ‘crystallises’ (i.e. becomes fixed) into its adult song form. This can be very similar to the original tutor’s song (Image: Wikimedia Commons)

Male zebra finches (Taeniopygia guttata) learn their courtship song in stages. During the ‘sensory phase’ juvenile birds listens to birds in their environment. In the sensorimotor phase, it starts to ‘babble’; a... morettempting copied versions of the song (the ‘sub song). Later the bird begins to generate subtle variability within highly structured syllables (as shown on the sonograph – letters refer to sound syllables). At sexual maturity the song ‘crystallises’ (i.e. becomes fixed) into its adult song form. This can be very similar to the original tutor’s song (Image: Wikimedia Commons)

Language is a human-made tool that fulfils specific needs. A biologist would regard speech as a behaviour which is integrated into how the body works, and which enabled our ancestors to survive better. We are proof that this is so. For speaking to have evolved implies that our current form of language behaviour arose and was refined gradually through natural selection.

Language, like our other complex behaviours, is learned. Children do not learn to speak without contact with other humans. Our language skills develop into adulthood and change continuously; we are always acquiring and using new words.

Other animals and birds that learn complex forms of song have a sensitive period for learning these calls (the ‘imprinting period) which reduces substantially as they mature.

Whether ‘imprinting’ also applies to humans is controversial. We cannot easily assess whether an adult student, meeting a new language starts from the same basis, is exposed to the same amount of data as a child acquiring their first language. Also their reasons for learning are different; children are building a sense of identity as they grow their speaking capacity. This difference affects how people learn at different stages of their lives.

The case of Kaspar Hauser gives us some insight. This boy first encountered language in his teens. When later enough vocabulary had been acquired, he was able to describe some of his earlier life, indicating that he was able to ‘think’ before he could speak. However he never fully mastered grammar. It is this additional level of word ordering that allow us to sort and structure our thoughts.

The efficiency of the brain in handling language is moulded by experience.  Many of the language functions use same brain networks as are needed by musicians when playing an instrument.   People trained in music from a young age have superior language abilities compared to non-musicians (Image: Wikimedia Commons)

The efficiency of the brain in handling language is moulded by experience. Many of the language functions use same brain networks as are needed by musicians when playing an instrument. People trained in music from a you... moreng age have superior language abilities compared to non-musicians (Image: Wikimedia Commons)

Most likely, the sophisticated songs of some birds, dolphins and certain other social mammals are driven by sexual selection. So too is the descent of the larynx in human males at puberty, which affects the pitch of their voice. This suggests that human vocal calls have been important for mate choice at some stage in our evolution. However our main vocal differences, revolving around vocal pitch and tone, mostly reflect the individual’s body size. We have no gender bias in our capacity for speech, suggesting that selection for language provided our ancestors with group-wide survival benefits.

Although we can assume that language-based survival advantages have driven the evolution of our sound-making apparatus and the mental processes that we use for speech, language also codes information that we inherit. Crucially, this is independent of our genetics. Selection for access to this cultural information acts at the level of our social group. It has crafted us into a diverse population of accomplished makers and sharers of sound, movement and meaning.

What does our language enable us to ‘do’?

i. We express the contents of our minds through physical movement
Andrey Ermakov performing the character ‘Ali’ in the ballet "Le Corsaire" (The Pirate); July 17, 2012. Ballet is a dance tradition using a repertoire of stylised moves.  Within the Chinese ballet tradition, as well as the overall production playing a storytelling role, the stylised movements of the dance themselves carry complex meanings which are important for storytelling.  This used to be also part of the ballet tradition in western Europe, but faded from the tradition after the mid 19th century (Image: Wikimedia Commons)

Andrey Ermakov performing the character ‘Ali’ in the ballet Le Corsaire (The Pirate); July 17, 2012. Ballet is a dance tradition using a repertoire of stylised moves. Within the Chinese ballet tradition, as well as ... morethe overall production playing a storytelling role, the stylised movements of the dance themselves carry complex meanings which are important for storytelling. This used to be also part of the ballet tradition in western Europe, but faded from the tradition after the mid 19th century (Image: Wikimedia Commons)

We speak by moving our bodies in a way that generates signals in one or more communication modes. Although we tend to conform to our group’s agreed use as to what words mean, we make this ‘dance’ of stylised gestures our own. The sound of our voice, like the way we walk, and even the way we sign our name, is individual, distinctive and recognisable.

ii. We order our thoughts (and actions) into sequences

Often we mentally list our tasks, and imagine carrying them out in a specific order before we act. In this way, we use language to define, structure and plan out our experience.

iii. We code our experience with meaning

We share an understanding of word meanings with other users, although we code that meaning individually. Thinking of a phrase, such as ‘moved to respond’, activates the mirror neuron network. This maps our physical and emotional understanding of the words onto relevant areas of our brain, in particular the sensori-motor cortex and limbic system. Our internal coding of words depends upon the emotions we tag to our memories, and relates us to a physical, ‘embodied’ experience of their meaning. iv. We shift our awareness between details and concepts

Hawaiian petroglyphs from the Big Island.   Symbolic content carries meaning at different levels.   In the traditional Huna language of Hawaii, words have meaning at different levels.  The word ‘huna’, literally translated, means ‘secret’.  Broken into syllables, ‘hu’ refers to ‘male’ or ‘active energy, and ‘na’ is ‘female’ or ‘passive’ energy.  The word also has a higher meaning of ‘hidden, esoteric knowledge’ (Image: Wikimedia Commons)

Hawaiian petroglyphs from the Big Island.Symbolic content carries meaning at different levels.In the traditional Huna language of Hawaii, words have meaning at different levels. The word ‘huna’, literally translated... more, means ‘secret’. Broken into syllables, ‘hu’ refers to ‘male’ or ‘active energy, and ‘na’ is ‘female’ or ‘passive’ energy. The word also has a higher meaning of ‘hidden, esoteric knowledge’ (Image: Wikimedia Commons)

When we turn a verb into a noun (e.g. speaking becomes ‘speech’) we have generalised an action idea into a more abstracted form. This assigns a symbolic understanding to the new word. As we relate them, our experiences become coded as concepts and metaphors; in this way big ideas are put into words. We also code meaning through sayings and stories.

v. We define our reality in various ways.

Ever heard of ‘performatives’? These are a special class of verb whose utterance changes our circumstances.

– When a judge declares ‘I sentence you to life imprisonment’, this statement alters the course of the life of its recipient in the dock.

– Oaths, e.g. marriage vows, are performative statements. These declarations of intention commit us to a voluntary long lasting change in our behaviour.

– Coining or learning new words brings these new ideas into our consciousness. This opens up new possibilities and affects how we respond to our circumstances. Our values, the things that are important to us, inform the beliefs we hold around our sense of self, and affects the way we derive meaning from our experiences. We internally translate our beliefs and values as presuppositions, i.e. what we assume is true about our world. These define what we allow ourselves to think, inform how we behave, and determines how we respond to and evaluate our circumstances.

vi. We visit experiences outside of the present moment
‘The TARDIS’, which looks like a police phone box from 1950’s Britain, features in a popular and long-running UK TV series called ‘Dr Who’.  Its main character, known as ‘The Doctor’ uses this vehicle to travel in time and space.   ‘The Doctor’ periodically reinvents himself, as has the TV series of which he is part (Image: Wikimedia Commons)

The TARDIS, which looks like a police phone box from 1950’s Britain, features in a popular and long-running UK TV series called Doctor Who. Its main character, ‘The Doctor’ uses this vehicle to travel in time and ... morespace. The Doctor periodically reinvents himself, as has the TV series (Image: Wikimedia Commons)

When we re-live our memories, and access the memories of others, we ‘travel’ in time and space. As we re-visit our memories, our past thoughts reappear in the present moment, and in a different location. Telling others about something allows us to journey with them through the story.

Typically we mention only the important details; this filters the narrative for its meaningful events. Telling a story in a different way, or altering the sequence of events in a tale, can alter how we feel about and relate to these events. This ‘reinvention’ changes their meaning.

viii. We become more like each other as we connect through language To have a conversation, we accept a shared understanding of meaning of our words, how we order them into phrases, and the beliefs and values that are coded into the expressions we use. By ‘speaking the same language’, we connect with and accept a ‘cultural norm’.

For language to have had a selective advantage, the benefits of conforming to the behaviour of our cultural group must have outweighed the reproductive success of being a ‘maverick’. We are living proof that this symbol-based group communication system works. Choosing group cooperation through collective action enhanced the survival of our ancestors.

Does this define how we think?

‘The Thinker’ by Auguste Rodin, at the Legion of Honour, San Fransisco.  This is one of a number of over-life size bronze casts based on the twenty seven inch high original version, made for the Paris exhibition of 1889 (Wikimedia Commons)

The Thinker by Auguste Rodin, at the Legion of Honour, San Fransisco. This is one of a number of over-life size bronze casts based on the twenty seven inch high original version, made for the Paris exhibition of 1889 (W... moreikimedia Commons)

Asking ‘how does language enable us to think?’ presupposes that thinking involves language. This constrains what we might think of as ‘thinking’. ‘Thinking’ can and does take place without speech. If we focus our attention to listen to or look at something, we are directing our actions and thoughts without using language. Presumably animals ‘think’ in this way.

Language, however, takes us into a different mental mode from animal thinking. We use words to articulate the contents of our own minds to ourselves. Words link meaning with sounds, gestures or images that need not bear any relation to what they symbolise. Accordingly, we are the only animal capable of coding meaning into symbols and communicating our understanding through how we combine them.

A very few species of animals, e.g. dolphins and elephants, can recognise themselves in a mirror, as demonstrated by the way in which they use this reflection to examine a mark placed out of sight on their body. This implies that they understand the difference between ‘self’ and ‘other’ (a ‘theory of mind’).

Any communication, whether written or spoken, codes information and meaning which must be understood by both the sender and receiver of the message.   The Rosetta Stone, originally from an ancient Egyptian temple (~196BC) shows parallel texts in ancient Egyptian, Demotic (an ancient language from the Nile Delta) and ancient Greek.  This ‘cipher’ enabled scholars to decode and translate ancient Egyptian hieroglyphs (Image: Wikimedia Commons)

Any communication, whether written or spoken, codes information and meaning which must be understood by both the sender and receiver of the message. The Rosetta Stone, originally from an ancient Egyptian temple (~196BC)... more shows parallel texts in ancient Egyptian, Demotic (an ancient language from the Nile Delta) and ancient Greek. This ‘cipher’ enabled scholars to decode and translate ancient Egyptian hieroglyphs (Image: Wikimedia Commons)

When we ‘think’ about something, it goes beyond what we see, hear and feel. Information is processed by the unconscious mind. This then presents our conscious mind with a constructed representation of what we perceive, tagged with an emotion which codes meaning into the content of the thought. The way we build this internal world is affected by both our personal perspective, and our shared cultural experience.

Words define what we think something is, and therefore also what it is not. This frames our awareness of it, creates boundaries around what we perceive, and directs the level of attention we give it. Questions frame our choices to a reduced number of alternatives (“Is it this, that, or even those?”). This limits the number of possible outcomes. However we define thinking, we are the only animal capable of thinking about thinking. This is a unique feature of human language, and idea underpins Descartes’ famous phrase;

I think, therefore I am

What do we think about language?

Studies of language have varied between two viewpoints which highlight a bigger question: how we think about our physical selves. The ‘classical’ view of self thinks of the body as functioning separately from the mind (a ‘mind-world’ perspective). Thinking of our language in this way leads us to suggest that our ability to speak develops ‘innately’, much like our limbs and kidneys, and presumably through a genetically controlled process. In the 1960’s Joseph Greenberg suggested that in all human languages. words like nouns and verbs play similar roles. Noam Chomsky then developed this idea into his ‘theory of language’, suggesting that all human languages have a similar basic structure, which he calls a ‘universal grammar’. His framework has provided the starting point for a systematic study of what human language is.

This map (by Luigi Luca Cavalli-Sforza, 1994) shows the generalised genetic relationships between human populations worldwide.  Chomsky’s approach to language infers that our linguistic diversity is like our genetic diversity.   Genetic differences can appear vast, but we are one interbreeding population and at the level of our genes, we are much more alike than we are unalike (Image: Wikimedia Commons)

This map (by Luigi Luca Cavalli-Sforza, 1994) shows the generalised genetic relationships between human populations worldwide. Chomsky’s approach to language infers that our linguistic diversity is like our genetic di... moreversity.Genetic differences can appear vast, but we are one interbreeding population and at the level of our genes, we are much more alike than we are unalike (Image: Wikimedia Commons)

Chomsky’s ‘universal grammar’ presupposes that all human languages are much the same. In this model, differences in vocabulary and word order are seen as ‘parameters’ (characters), and that any language is built from a subset of these characters. He has famously suggested that:

“…if a Martian was looking at humans the way we look at, say frogs, the Martian might conclude that there’s fundamentally one language with minor deviations.”

The Chomskyan view suggests that variations between languages, like the ordering of nouns and verbs, represent a limited set of choices. In this scenario, it is proposed that a child learning its first language would select from these choices through a genetic or developmental mechanism, triggered by the language input they receive. This idea is reminiscent of bio-genetic switches which ‘shuffle’ between genes, e.g. those that encode how quickly a virus induces symptoms in its host. This would imply that our children ‘look for’ cues to indicate which word order setting they need to ‘activate’ at the genetic level.

Frequency distribution of word order in languages, after Tomlin (1986) p22.  S = ‘Subject’ (noun performing the action in the phrase), O = ‘Object’ (noun acted upon), V = ‘verb’ (the action which is performed).
Word order Short clause equivalent in English Proportion of world languages with this pattern Examples
SOV “She him hears.” 45% Japanese, Latin, Turkish
SVO “She hears him.” 42% English, Mandarin, Russian
VSO “Hears she him.” 9% Hebrew, Zapotec, classical Arabic, Irish, Welsh
VOS “Hears him she.” 3% Malagasy, Baure
OVS “Him hears she.” 1% Apalaí?, Hixkaryana?
OSV “Him she hears.” <1% Warao

What might these cues be? The three-word ‘short clause’ is perhaps our simplest form of syntax, and is present in every language. In this phrase an item (the subject noun, S) acts on another item (the object noun, O) and the nature of that action is indicated by the verb (V), e.g. ‘scissors cut paper’ is SVO. Across the world’s languages, these words are used in all of the possible orders. However some of these forms are rare.

This uneven ratio of word ordering is reminiscent of the different ratio of forms (alleles) known for some genes. For example, genes encoding subunits of haemoglobin are found in almost all vertebrates, some invertebrates, and even some plants. Haemoglobin is found in our red blood cells; it binds oxygen at the high concentrations in our lungs, and releases it elsewhere in the body. Various forms of globin genes exist.

An artificially coloured scanning electron micrograph of red blood cells from a sickle cell anaemia sufferer.  The red blood cells become crescent-shaped (sickle shaped) at low oxygen concentrations.  The mutation in the beta-globin gene that causes this condition is more common in populations from malaria-prone regions.  Malaria parasites invade red blood cells and reproduce asexually; this progresses more slowly in sickle cells, reducing the severity of the disease for the human sufferer, and increasing their chances of surviving the infection (Image: Wikimedia Commons)

An artificially coloured scanning electron micrograph of red blood cells from a sickle cell anaemia sufferer. The red blood cells become crescent-shaped (sickle shaped) at low oxygen concentrations. The mutation in the ... morebeta-globin gene that causes this condition is more common in populations from malaria-prone regions. Malaria parasites invade red blood cells and reproduce asexually; this progresses more slowly in sickle cells, reducing the severity of the disease for the human sufferer, and increasing their chances of surviving the infection (Image: Wikimedia Commons)

Most of us carry two ‘normal’ copies of the beta-globin gene (HbB) on chromosome 11, one on each of our chromosomal pair i.e. HbB/HbB. The HbS allele causes sickle cell disease (a form of anaemia) when one gene copy is present (i.e. HbB/HbS). Two HbS copies are lethal; not surprisingly, this keeps the mutation at a low frequency in most populations. However in West Africa, where malaria is a major scourge, 25% of individuals are HbB/HbS. The sickle cell condition provides some resistance to the malaria parasite, hence selection in this local population has acted to maintain this gene at a higher frequency.

Does selection in this way also apply to language structure? There is no clear indication that it does; there seems to be no obvious situation that favours some short clause options over others. After all, they all perform their function equally well. If word order had a genetic basis but no selective advantage, we would expect a more even distribution of forms in our languages worldwide. In practice, the form of a language’s short clause depends upon the cultural family from which that language arises.

Far from having a genetic basis, this view anchors grammatical structure to its history and circumstances. Nicholas Evans and Stephen Levinson have shown that the main characteristic of human communication worldwide is not its commonality, but its variation. Language forms vary so radically that in reality they find ‘vanishingly few universals’. Instead, human speech is characterised by its diversity in all aspects of its production including sound, meaning and syntax.

Whilst it seems that the grammar and syntax of language have no genetic basis, still we must have evolved our current capacity language. Our language function requires a physical means to produce the diversity of human speech sounds, and a cognition that allows us to think about what to say and understand what others are saying. These physical and mental capacities are not separate. Darwinian selection acts on whole bodies, meaning that language evolution, like the neural coding of our speech, is an ‘embodied’ process.

Philip Lieberman’s work has focussed on how the physical apparatus required to produce our speech may have arisen. He suggests that increases in the potential diversity of our ancestors’ speech signals were made possible by changes in their vocal tract, which were required to adapt their breathing and balance to fit an increasingly upright posture and bipedal locomotion.

A watchmaker at work.  The watchmaker’s craft uses a degree of fine motor control and hand-eye coordination which is unprecedented in the animal kingdom (Image: Wikimedia Commons)

A watchmaker at work. The watchmaker’s craft uses a degree of fine motor control and hand-eye coordination which is unprecedented in the animal kingdom (Image: Wikimedia Commons)

Maintaining our posture would have required better fine motor control of the muscles used for balancing, breathing and eating, and also freed the hands, enabling better manipulation of tools. Chimpanzees do not have our levels of fine motor control. Producing sequences of actions involved with using manual tools have similar cognitive requirements to producing ordered sequences of speech sounds. In essence, evolving to ‘stand on our own two feet’ may have taught us to coordinate not only our walking but also our hand and finger movements, our voices, and possibly our thinking.

When we communicate, we physically relate to each other’s internal world through the actions of our mirror neurons. The chemical messages that these and other nerve cells use to ‘talk’ to each other are also recognised and produced by the cells of our immune system. In addition, our gut produce these same neurological chemicals as are found in the brain. This shows us that at the level of these information-carrying molecules, our mind and our physical body are in practice a single entity (a ‘body-mind’). This body-mind interacts with its environment, and changes biochemically according to the food we eat, the air we breathe, what we choose to think, and the company we keep.

Daniel Everett ’s lifetime study of the Pirahã people from the upper Amazon provides clues as to how our culture and language fit us to our environment. The Pirahã value self-reliance and eye-witness experience. They avoid assimilating non-Pirahã words into their language because they consider their traditional ways to be superior. They never combine their short, one-verb sentences into longer phrases (meaning they lack ‘classic’ Chomskyan recursion ), although they do combine ideas recursively by using sentences together. They use only a minimal form of past tense, and lack a mythology and a concept of numbers. Yet their cultural knowledge and attitude equips them to survive easily for many days in the jungle, as Everett puts it, ‘…equipped with only their wits and a machete’.

Goosebumps!  This is body language for ‘I feel cold/scared/excited, and perhaps other meanings, according to context (Image: Wikimedia Commons)

Goosebumps! This is body language for ‘I feel cold/scared/excited, and perhaps other meanings, according to context (Image: Wikimedia Commons)

Viewing ourselves as a ‘body-mind in a context’, we see that local conditions define how we must behave in order to survive. Language in this sense is a cultural tool that enables us to fit our ecological niche, and do so coherently as a social group. Since in biological terms our mind, emotions and physical sensationsare all the language of a simultaneous, single system, our speech enables us to articulate how this ‘body-mind’, relates to its environment.

I am there, therefore I feel. (At least, I think I can…)

What questions does this allow us to ask about language?

Chomsky suggests that the rules of our language are ‘innate’, arising from our genetics in a predetermined manner, like a body organ. In contrast, the biological evidence, along with Everett’s fieldwork with the Pirahã, suggests instead that the physical structure of our vocal tract, our fine motor control, and our capacities to think in sequences and in symbolic ideas arose as a whole integrated body-mind system.

This combined set of characteristics provided the proto-language function which became refined over evolutionary time into our current communication capacity. This speaking capacity enabled our ancestors to transmit information and behaviours culturally, without directly involving our genetics. Our language function allows us to quickly and flexibly adapt our behaviour to our circumstances.

So: Darwin: 1, Chomsky: 0?

‘Idle thoughts’ by John Willam Godward, 1898; Leicester Museum and Art Gallery.  Human language makes possible an internal ‘self-talk’ (Image: Wikimedia Commons)

Idle thoughts by John Willam Godward, 1898; Leicester Museum and Art Gallery. Human language makes possible an internal ‘self-talk’ (Image: Wikimedia Commons)

There is however an ‘innate organ’ in the body that makes structured language possible; our brain. It enables us to receive and process our sensory experiences, think intentionally, connect meaning to objects, link ideas, and evaluate memories. To use language, we must be able to perform these cognitive actions, although they are not exclusive to our ability to speak.

Our consciousness allows us to build an internal world in which we use language to define what we think, and to direct these thoughts towards others and back to ourselves. And in this integrated view, where our inner ‘self-talk’ and outer shared speech are part of the same process, Noam Chomsky’s idea of language as a universal innate human mechanism seems to find a home.

Perhaps: Darwin: 1, Chomsky + Darwin = >1

What are we able to say to ourselves about language?

The legend of the ‘Tower of Babel’ portrays the diversity of human languages as a curse. Yet each language is a cultural expression of values, arising in a specific context and anchoring its speakers into a set of attitudes and behaviours which adapt them to their environment. Around the globe, our ecological settings are varied and diverse. According to Daniel Everett, our cultural habits and traditions, transmitted through language, collectively ‘fit’ us to this local ecology with exquisite precision. In evolutionary survival terms, this is a huge strength.

‘Construction of the Tower of Babel’ (painted 1604 by Abel Grimmer).  The tower of Babel is the focus of a story from the book of Genesis (from the Jewish scriptures and Christian Old Testament).  According to this story, the people of earth sought to ‘make a name for themselves’ by building a great city with a tower right up to heaven.  Their God considered this as giving the people too much power, so inflicted a ‘confusion of tongues’ upon them, thanks to which they began to speak different languages and scattered across the earth (Image: Wikimedia Commons)

Construction of the Tower of Babel (painted 1604 by Abel Grimmer). The tower of Babel is the focus of a story from the book of Genesis (from the Jewish scriptures and Christian Old Testament). According to this story, t... morehe people of earth sought to ‘make a name for themselves’ by building a great city with a tower right up to heaven. Their God considered this as giving the people too much power, so inflicted a ‘confusion of tongues’ upon them, thanks to which they began to speak different languages and scattered across the earth (Image: Wikimedia Commons)

So what can we say about language?

– It is at once physical and embodied, yet held outside of ourselves in our culture. It is symbolic, emotional, moving, fixed into iconic forms, generalised, specific, and allows us to articulate our internal and external awareness.

– Its form and content, rules and structures are mimicked and learned, yet are also dynamic, constantly being revised and re-drafted as we interact with each other.

– It has evolved through our biology, and is still evolving, remodelling itself to each location, age and culture, whilst holding ideas steady and focussing and fixing our thoughts on specific details.

– It is the way we both define our understanding and code meanings. It is made possible by the way in which we break out of old ways of understanding and find new meanings.

– It uses physical movement to transmit information and reveal feelings and emotions. Observing these movements re-creates that other speakers’ reality in the body-mind of the listener.

– It can adapt itself to any channel, transmitting messages through tones, gestures, syllables, drum rhythms, dots and dashes, touch, or written words.

– It has enabled us to adapt our collective behaviour to fit almost every habitat on earth, and continues to be the means by which we organise ourselves to collectively expand beyond our current limits.

In short, language is a cultural tool, made by us and moulded to our needs. It unites us as a species, and is a vehicle through which we express our uniqueness and diversity. And it enables us to tell ourselves the greatest story ever told.

Our story.

Text copyright © 2015 Mags Leighton. All rights reserved.

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A sense of protection: is the immune system an extension of our minds?

Entering a body is much like entering a country.

At the border, agents verify the identity of those seeking to pass, and establish their status as ‘native’, a ‘naturalised resident’, or ‘alien’. Clarity about the identity of these travellers allows them to be appraised as ‘friend’ or ‘foe’.

The body of a nation operates best with safety measures in place. Its borders are a first line of surveillance that ascertains when to mobilise defences.

Border checks in some countries are more efficient; they deploy new technologies to implement higher orders of monitoring and identification.


Scanning electron microscope image of a neutrophil, a cell from the innate immune system (yellow), engulfs anthrax bacteria (orange); scale bar = 5 micrometres.   Body cells that experience stress, wounding, or sense the presence of bacteria, produce cytokines and other signals that trigger the innate immune response, and attract immune cells into the tissues.   Some of these cells (‘phagocytes’) like this neutrophil, engulf and digest the invaders, whilst others (‘granulocytes’) secrete granules of cytokine, histamine and various types of oxygen free radicals, all of which enhance the inflammation response.  Proteins in the blood, the ‘compliment system’, also condense onto and coat unwanted bacterial invaders and other particles.  This targets them for destruction by phagocytes, or removal from the blood stream in the spleen (Image: Wikimedia Commons)

Scanning electron microscope image of a neutrophil, a cell from the innate immune system (yellow), engulfs anthrax bacteria (orange); scale bar = 5 micrometres.Body cells that experience stress, wounding, or sense the p... moreresence of bacteria, produce cytokines and other signals that trigger the innate immune response, and attract immune cells into the tissues.Some of these cells (‘phagocytes’) like this neutrophil, engulf and digest the invaders, whilst others (‘granulocytes’) secrete granules of cytokine, histamine and various types of oxygen free radicals, all of which enhance the inflammation response. Proteins in the blood, the ‘compliment system’, also condense onto and coat unwanted bacterial invaders and other particles. This targets them for destruction by phagocytes, or removal from the blood stream in the spleen (Image: Wikimedia Commons)

Typically we think of the immune system as a defence mechanism; the forces we mobilise to fight disease.  Animals, plants, fungi and microbes all have a form of this type of defence.  Even bacteria have a version of immunity, using enzymes that can react to and then digest viral proteins.

Immune responses in animal systems are thought of as having two levels of action.

Innate immunity

First, ‘innate immunity’ provides a spectrum of responses which use secreted proteins and dedicated cell types to target common components of a broad range of diseases.

Amongst animals, invertebrate bodies are relatively simple.  In contrast, vertebrates have increased genetic and physical complexity, more sophisticated sensory perceptions and cognitive processing  and, in some clades, enhanced social organisation and communication.  This increased complexity is reflected in the vertebrate immune system.

The lymphatic system of a human female.  This network of vessels allows immune system cells rapid access to all areas of the body.  Lymph vessels interconnect with the blood circulation at the heart and lymph nodes.   Two organs are particularly important in this network. •The thymus gland polices antibody-producing adaptive immune system cells, filtering out those which are too close to recognising native body proteins.   •The spleen synthesises antibodies in its white pulp, and releases these proteins into the blood stream, where they bind to foreign proteins, such as those present on the surface of bacteria.  This targets cells and other debris in the blood.  The spleen removes antibody-coated bacteria and old red blood cells from the circulation.  It also acts as a reservoir for monocytes, immune cells which later develop into phagocytic (non-specific engulfing) cells (Image: Wikimedia Commons)

The lymphatic system of a human female. This network of vessels allows immune system cells rapid access to all areas of the body. Lymph vessels interconnect with the blood circulation at the heart and lymph nodes.Two or... moregans are particularly important in this network.• The thymus gland polices antibody-producing adaptive immune system cells, filtering out those which are too close to recognising native body proteins.• The spleen synthesises antibodies in its white pulp, and releases these proteins into the blood stream, where they bind to foreign proteins, such as those present on the surface of bacteria. This targets cells and other debris in the blood. The spleen removes antibody-coated bacteria and old red blood cells from the circulation. It also acts as a reservoir for monocytes, immune cells which later develop into phagocytic (non-specific engulfing) cells (Image: Wikimedia Commons)

Adaptive Immunity

The second form of immune response, known as ‘adaptive immunity’, refers to the ability to identify and target specific invaders.  In vertebrates, this immune function first appeared in jawed fish.

In broad terms, it involves three phenomena.

– A new immunological organ (the thymus).

– A repertoire of specialised lymphocyte cells including T-cells (matured in and released from the thymus gland) and B-cells (released from the bone marrow), some of which produce antibodies.

– The production of a ‘self-identity’ signature, the ‘Major Histocompatibility Complex’ (MHC) proteins, in all body cells.

The community of bacteria associated with our gut, lungs  and other surfaces comprise the first line of defence.  This community of microbes (our ‘microbiome’) out-competes many harmful agents (pathogens).

Like the gut, our lung linings have a microbiome.  Both ’friendly’ microbes and infective agents (here Streptococcus pneumoniae and Pseudomonas aeruginosa) produce proteins and other substances that act as signals.  Cells lining our lungs act as signal receivers and recognise these chemicals, producing cytokines and other cues which relay messages to the immune system.   •  The signals from safe microbes (here Lactococcus lactis) cause only a weak release of cytokines (here interlukin 10 or IL10); this does not trigger inflammation.   •  Pathogens trigger the release of other cytokines (IL1 and IL6) and other signals that induce inflammation and trigger  innate immune cells to invade the area and activate the immune response (Image: Wikimedia Commons)

Like the gut, our lung linings have a microbiome. Both ’friendly’ microbes and infective agents (here Streptococcus pneumoniae and Pseudomonas aeruginosa) produce proteins and other chemicals that act as signals. C... moreells lining our lungs act as signal receivers and recognise these chemicals, producing cytokines and other cues which relay messages to the immune system.(Image: Wikimedia Commons)

 

If our body cells become infected or damaged, they release stress signals such as oxygen and nitrogen free radicals  and various peptides (short strings of amino acids) such as cytokines and defensins.  These cues act as messages to the immune system, potentially triggering inflammation and other chemical defences which attract immune cells into the tissue by chemotaxis.

The microbial community also produces these immune-stimulating signals, along with brain-active chemicals (neurotransmitters). In addition, these signals are also generated, recognised by, and responded to by immune system cells.

Diagram of an antibody.   These immune system proteins are a complex of four separate protein chains.  In this diagram, blue regions are consistent whilst the yellow regions are variable.  They are secreted into the blood stream or gut.  Adaptive immune cells use them as ‘antennae’.  When this signal receiver encounters an antigen that is a good fit, this triggers an adaptive response.    All proteins interact by shape.  Antibodies have a recognition region which is highly variable, giving a huge range of options for recognising a foreign protein (antigen).  These regions are produced by shuffling between alternative gene segments to produce variations.  The strongest immune reactions provide a ‘best fit’ to this three-dimensional molecular jigsaw (Image: Wikimedia Commons)

Diagram of an antibody. These immune system proteins are a complex of four separate protein chains. In this diagram, blue regions are consistent whilst the yellow regions are variable. They are secreted into the blood s... moretream or gut. Adaptive immune cells use them as ‘antennae’. When this signal receiver encounters an antigen that is a good fit, this triggers an adaptive response. All proteins interact by shape. Antibodies have a recognition region which is highly variable. The strongest immune reactions provide a ‘best fit’ to this three-dimensional molecular jigsaw. (Image: Wikimedia Commons)

Our neurons and immune cells both respond to hormones within our bodies, since chemically these are close to neurotransmitters.  This means that our brain, hormonal system, sensory nerves and extended microbial community  all share a common chemical language with the innate immune system, present in all animals.

The greater the biochemical diversity of cell populations in a body, the more opportunities there are for bacteria or viruses to find novel ways of attacking these cells.  For this reason, adaptive immune system cells themselves are vulnerable to certain types of disease.  For instance AIDS (Acquired Immuno-Deficiency Syndrome), caused by the Human Immuno-deficiency Virus (HIV), specifically targets and infects the adaptive immune system’s T-cells, using the very mechanism that allows these cells to detect infection – their surface antibodies.

Potentially then, adaptive immunity provides a much more sophisticated and versatile immune mechanism.  For vertebrates with their adaptive system to be ultimately more vulnerable to certain infections than the innate-only immunity of invertebrates seems bizarre and inefficient.  Yet adaptive immune systems have evolved independently twice in vertebrates.  This suggests that the adaptive mechanism must convey some survival advantages, but disease resistance may not be the primary role which has driven its evolution.

How does the system work, and what is the real purpose of adaptive immunity?

Adaptive mechanisms give our immune system a ‘memory’

In vertebrates, ‘adaptive immunity’ adds an additional higher-order function to the innate immune system by providing a means to both recognise and ‘remember’ specific diseases.  To do this, they use a protein recognition system; these are the familiar antibodies.

These proteins have a shape-specific region which fits the shape of part of a foreign protein (an antigen) like a key in a lock.  An antigen is a molecule that is capable of triggering an immune response; this can be from a foreign source (e.g. a virus) or produced by an unhealthy body cell, e.g. a cancer cell.

The adaptive immune system activates against pathogens that evade or overcome our innate immune defences.  When activated, this system “adapts” to the infection.  Phagocytic (innate) cells digest foreign proteins and then 'present' short pieces of them  (antigens) on their cell surfaces, along with a body protein, the ‘Major Histocompatibility Complex’ class II protein (MHC2).  This makes the antigen fragment visible to the adaptive immune system, and triggers a response.   This diagram shows the two types of adaptive response.  T lymphocytes (T cells) display an antibody on their surface that recognises the antigen, along with other surface proteins (here this is CD4+) making this T-cell into a '‘helper’ T-cell.  Helper cells then synapse with B lymphocytes (B cells) and trigger them to release antigen-specific antibody into the blood stream to 'seek out' and attach to the foreign invader.   These cells can also become ‘killer’ T cells, when they recognise a foreign antigen associated with a normal body cell.   B cells are matured in and released by the bone marrow.  T-cells undergo recombination (gene shuffling) in the thymus where they produce their specific antibody signal before being released into the blood stream (Image: Wikimedia Commons)

The adaptive immune system “adapts” to infections that get past our innate defences.  Phagocytic macrophage (innate system) cells behave like amoebae, and can engulf and digest foreign bacteria.  These ce... morells become ‘antigen presenting cells’ (APC), and displaying short pieces of bacterial protein (the antigen) on their cell surfaces, along with a self-signal, the ‘Major Histocompatibility Complex’ class II protein (MHC2).  The MHC tells the immune system that this cell is a messenger, not an invader.  These two proteins together activate the adaptive immune system.There are two types of adaptive response.  First, T lymphocytes (T cells) display an antibody on their surface that recognises the foreign fragment on an APC.  They then produce other surface proteins (here CD4+) that signal a change of identity, turning them into ‘‘helper’ cells.  Helpers can  provoke macrophages or B lymphocytes (B cells) to act.  An activated B cell releases antibodies into the blood stream that ‘seek out’ and identify the invader. T cells can also become ‘killers’ that recognise and destroy infected body cells. (Image: Wikimedia Commons)

 

Adaptive immune cells called T-cells produce antibodies and ‘display’ them from their cell surfaces, using them as ‘antennae’ to detect invaders.  Phagocytic (engulfing) innate immune cells can act as antigen presenting cells, displaying foreign protein fragments (antigens) on their surfaces.  T-cells whose antibody ‘fits to’ this antigen can then be triggered to respond.

Triggered T-cells divide multiple times, so producing identical clones of themselves.  This increases the magnitude of the body’s immune response to the infection.  Activated T-cells relay the signal in turn to adaptive B-cells, triggering them to secrete large amounts of antibody proteins specific to this foreign antigen into the blood.  These bind to the foreign antigens, coating the virus particles or foreign bacteria in antibodies.  This targets the innate system’s macrophages to ‘engulf and destroy’.

Immune system cells interact with each other in a similar way to nerve cells

The association between the antigen presenting cell and the activating T-cell is very close, and the trigger mechanism transmits a one-way signal between the cells.  This is very like how a nerve synapse transmits a signal to the next nerve.  It is therefore entirely reasonable to call it an ‘immunological synapse’.

This between-cell interaction, which here involves a specific recognition between the immune cells, arises from an ancient, general mechanism of between-cell communication that allows signal-transmitting contacts to form.  Activated T-cells initially show pulses of electrical activity, produced by a release of calcium ions (which carry an electrostatic charge) into the cell matrix (cytoplasm).

Synapses are stable contacts that form between two distinct cells that allow for information transfer through directed secretion.  Synapses between neurons in the brain form relatively stable contacts, although these remain ‘plastic’, able to be recruited into new neural networks  and adopted for new purposes.

In the immune system, ‘synapse’ formation between for example an antigen presenting cell and a T-cell, provokes the T-cell to initiate a signal relay transmitted to other cells which produces a range of specific ‘actions’.  These responses, resulting in defences that target the specific foreign antigen, are produced by cells further downstream of this initial ‘synapse’.

When a patient is first vaccinated, the adaptive immune system raises a response against the foreign antigens.  These cells persist at a high level for several weeks, then the antibody level and effector T-cell activity gradually declines.  When a patient is re-vaccinated, a stronger response results.  Selection favours T-cells with small differences in antibody binding that give a stronger reaction.  These highly specific clones remain in the serum and lymphatic tissues and provide protective immunity against reinfection by the same agent.  This gives a longer term immunological memory; later reinfection leads to a rapid increase in antibody production and effector T cell activity, which often prevents the disease from being apparent (Image: Wikimedia Commons)

When a patient is first vaccinated, the adaptive immune system raises a response against the foreign antigens. These cells persist at a high level for several weeks, then the antibody level and effector T-cell activity ... moregradually declines. When a patient is re-vaccinated, a stronger response results. Selection favours T-cells with small differences in antibody binding that give a stronger reaction. These highly specific clones remain in the serum and lymphatic tissues and provide protective immunity against reinfection by the same agent. This gives a longer term immunological memory; later reinfection leads to a rapid increase in antibody production and effector T cell activity, which often prevents the disease from being apparent (Image: Wikimedia Commons)

 

Vaccinations activate our body ‘memory’

By cloning and maintaining a population of cells with disease-specific antibodies, our immune system ‘remembers’ how it responded to the disease.  A second exposure produces a refinement of the accuracy of the recognition mechanism, and raises a population of ‘memory T-cells’ that persist in the body for much longer.  This is the basis of vaccination. Exposing our immune systems to proteins from the infective agent, via an injection, allows us to develop resistance in a controlled, safe way.  Our bodies raise a population of immune cells that ‘remember’ how to recognise these foreign proteins.  If we later meet the disease, these ‘memory cells’ activate, enabling us to more quickly overcome the infection and contract only a mild version of the disease, or perhaps experience no symptoms at all.

These mechanisms suggest that adaptive immunity should provide enhanced resistance to diseases beyond what the innate response alone can deliver.  In practice, however, invertebrates seem to be vulnerable to fewer diseases than we are.  This may be a result of their simpler and less diverse profile of cell and tissue types.

Diagram of an HIV particle.   Using cell surface antibodies as an infective agent identification mechanism means that immune cells can in turn become ‘visible’ to these pathogens.   The Human Immunodeficiency Virus (HIV) which causes Acquired Immuno-defficiency Syndrome (AIDS) specifically identifies T-cells.  This virus is a master of disguise; it uses a similar gene shuffling mechanism as are used to produce variable proteins on the surface of its viral capsule.  This changeability makes the virus seem to always be something new – this is the reason that the immune system has difficulty recognising and neutralising it, and also is why the virus has been so difficult to target using a vaccine.   The interaction between an infection and the host immune system is usually like a predator prey relationship.  The immune system is the ‘predator’, chasing down to consume the infection (the ‘prey).  In the case of HIV, these roles are unclear.  Is the virus pursing the immune cell, or is the immune cell pursuing the virus? (Image: Wikimedia Commons)

Diagram of an HIV particle. Using cell surface antibodies as an infective agent identification mechanism means that immune cells can in turn become ‘visible’ to these pathogens. The Human Immunodeficiency Virus (HIV... more) which causes Acquired Immuno-defficiency Syndrome (AIDS) specifically identifies T-cells. This virus is a master of disguise; it uses a similar gene shuffling mechanism as are used to produce variable proteins on the surface of its viral capsule. This changeability makes the virus seem to always be something new – this is the reason that the immune system has difficulty recognising and neutralising it, and also is why the virus has been so difficult to target using a vaccine. The interaction between an infection and the host immune system is usually like a predator prey relationship. The immune system is the ‘predator’, chasing down to consume the infection (the ‘prey). In the case of HIV, these roles are unclear. Is the virus pursing the immune cell, or is the immune cell pursuing the virus? (Image: Wikimedia Commons)

 

Why would vertebrates evolve this expanded complexity in their immune system? 

Every living thing, including plants and bacteria, possess an immune system of some kind.  What we recognise as innate immunity is found in plants and also throughout the animal kingdom.  Adaptive immunity raises the degree of complexity.  Significantly, it has evolved twice independently within the vertebrates; in jawed vertebrates (sharks to humans) and also in the more ‘primitive’ jawless clades.  Certain invertebrate groups (e.g. snails and insects), and indeed also bacteria, have a quasi-adaptive system, using specific, cross-reactive molecules, although these systems are not as sophisticated as that found in the vertebrates.

A river lamprey (Lampetra fluviatilis) from the German North Sea.   The immune systems of this and other jawless fish such as the hagfish have been found to contain adaptive cells which act in a similar way to T- and B- lymphocytes of the jawed vertebrates.  Here the membrane proteins acting as signal receivers are different, based on receptors containing leucine-rich motifs.   As in their jawed cousins, the immune responses of lampreys produce a clonal increase of specific disease-detecting cells (Image: Wikimedia Commons)

A river lamprey (Lampetra fluviatilis) from the German North Sea. The immune systems of this and other jawless fish such as the hagfish have been found to contain adaptive cells which act in a similar way to T- and B- l... moreymphocytes of the jawed vertebrates. Here the membrane proteins acting as signal receivers are different, based on receptors containing leucine-rich motifs. As in their jawed cousins, the immune responses of lampreys produce a clonal increase of specific disease-detecting cells (Image: Wikimedia Commons)

Studies in the jawless fish, lamprey and hagfish, show that a very different form of adaptive system has arisen than is found in jawed vertebrates, co-opted from a different set of genes and proteins.  In contrast, their immune molecules include proteins with repeated sections in the chain which have multiple residues of the amino acid leucine (termed ‘Leucine Rich Repeats’, or LRRs).  A form of LRR-based adaptive immunity is also found in plants.

Jawed vertebrate adaptive immunity however is rather more developed than that of the jawless fish.  Jens Rolff makes two intriguing suggestions as to what may have driven its evolution.

An adult beef tapeworm (Taenia saginata) from a human gut (Image: Wikimedia Commons)

An adult beef tapeworm (Taenia saginata) from a human gut (Image: Wikimedia Commons)

i. Vertebrate bodies are larger and more complex than invertebrates, providing a new set of potential habitats for parasites.  Rolf suggests that an evolutionary ‘arms race’ may have occurred between vertebrates and a group of parasitic Platyhelminthes, which include tapeworms and liver flukes.  These parasites began to diversify after the evolutionary divergence between jawed and jawless fish.

The surface of these parasites is highly resistant to our immune defences, suggesting that they co-evolved in tandem with an immune-competent host.  The increasingly more aggressive and targeted immune response required from the host to expel these parasites may have selected for the direct recognition mechanism and targeted responses of adaptive immunity.  This theory also implies that the adaptive components of the immune system originally evolved in association with the gut.

ii. Vertebrates have higher metabolic rates than invertebrates.  This allows for greater rates of activity and access to a wider range of ecological habitats.  Higher energy bodies require more sophisticated brains and nervous systems, and have higher maintenance demands.

Scheme showing a DNA ligase-I enzyme (in color) repairing a break in DNA.   DNA damage, caused by environmental factors and normal metabolic processes, occurs at a rate of 1,000 to 1,000,000 molecular lesions per cell per day. Without maintenance to mend such breaks, cells can malfunction, die, or become cancerous.  Ligases catalyse the crucial step of joining the breaks in the spiralling DNA strand.  To do so they require energy, in the form of either Adenosine triphosphate (ATP) or Nicotinamide adenine dinucleotide (NAD+) as a cofactor (Image : Wikimedia Commons)

Scheme showing a DNA ligase-I enzyme (in color) repairing a break in DNA. DNA damage, caused by environmental factors and normal metabolic processes, occurs at a rate of 1,000 to 1,000,000 molecular lesions per cell per... more day. Without maintenance to mend such breaks, cells can malfunction, die, or become cancerous. Ligases catalyse the crucial step of joining the breaks in the spiralling DNA strand. To do so they require energy, in the form of either Adenosine triphosphate (ATP) or Nicotinamide adenine dinucleotide (NAD+) as a cofactor (Image: Wikimedia Commons)

 

Rolff suggests that the adaptive immune system is part of the normal homeostasis of a higher energy metabolism.  Such regimes also produce higher concentrations of oxygen free radicals and other stress-associated compounds which can damage DNA and cause cancers.  High energy vertebrate bodies therefore require a means of self-monitoring.  The adaptive immune system may provide just such a set of ‘internal eyes and ears’.

How does the adaptive immune system function in vertebrates?

Our immune system discerns ‘friend’ from ‘foe’, ‘self’ from ‘non-self’ and monitors the status and identity of our own body cells.  The adaptive system provides specific ways to identify and monitor foreign and native body cells.

An immunological synapse relay is triggered when for example a T-cell antibody recognises a foreign protein on an ‘antigen presenting cell’.  This and other types of immunological synapse require a class of proteins related to antibodies; the ‘Major Histocompatibility Complex’ (MHC) proteins.

Vertebrates produce and display MHC  proteins on their cell surfaces.  During an infection, if a virus or microbial pathogen enters a body cell, it becomes invisible to the immune system.  Infection, however, alters the health of the cell, reducing its surface MHC production.  Reduced or absent MHC triggers ‘Natural Killer’ (NK) cells to form an immunological synapse with them, this time triggering the destruction of the infected body cell, and helping to reduce the spread of the disease.

As a cell is first infected by a microbial pathogen, (as in this diagram), it quickly mobilises its protein-dismantling enzymes (the ‘proteasome’) to digest the foreign proteins into short fragments (peptides).  Specialised pores (‘Transport of Alien Protein’ or TAP channels) capture the fragments and shunt them into the endoplasmic reticulum, where the cell assembles its own proteins.  Here the fragments are bound to ‘Major Histocompatibility Complex’ class 1 (MHC I) proteins.  These are transported to the cell surface where they protrude like a beacon, presenting the foreign protein to the innate immune system’s ‘Natural Killer’ cells (Image: Wikimedia Commons)

As a cell is first infected by a microbial pathogen, (as in this diagram), it quickly mobilises its protein-dismantling enzymes (the ‘proteasome’) to digest the foreign proteins into short fragments (peptides). Spec... moreialised pores (‘Transport of Alien Protein’ or TAP channels) capture the fragments and shunt them into the endoplasmic reticulum, where the cell assembles its own proteins. Here the fragments are bound to ‘Major Histocompatibility Complex’ class 1 (MHC I) proteins. These are transported to the cell surface where they protrude like a beacon, presenting the foreign protein to the innate immune system’s ‘Natural Killer’ cells (Image: Wikimedia Commons)

MHC proteins also act as antigen presenting molecules.  At an early stage of infection, the cell’s own defences may digest some of the invading pathogen’s proteins.  These foreign antigens can be bound by MHC molecules, and presented on the cell surface.  Again, this triggers NK cells to target this body cell for destruction.

Antigen-presenting phagocytic immune cells also do this using a different class of MHC protein, which avoids them activating the NK cells.

Recent research has also shown an unexpected role for MHC proteins in neuronal plasticity.  Brain neurons require MHC class I molecules to establish new neural networks.  Along with a range of other immune system receptors, these molecules are critical for the construction of new connections and the remodelling of synapses.  This suggests that the transmission of a signal across the neural synapse and the immunological synapse are likely using the same mechanism.

What does this suggest as the primary role of adaptive immunity? 

The ‘molecules of emotion’ with their effects.  The mood effects that result from their deficiency in italics.  These neurotransmitters are the same chemical language as is used by cells of the immune system (Image: Wikimedia Commons)

The ‘molecules of emotion’ with their effects. The mood effects that result from their deficiency in italics. These neurotransmitters are the same chemical language as is used by cells of the immune system (Image: W... moreikimedia Commons)

Candace Pert’s work demonstrated that immune cells both respond to and produce the same neurotransmitter signals as brain neurons.  She initially found opiate receptors from the brain in immune system cells.  Opiates are drugs that trigger the body’s responses to endorphins, the body’s natural ‘feel good’ chemicals.  Pert showed that receptors for neurotransmitters which affect our mood; the ‘molecules of emotion’ including b -endorphins and serotonin, are present in immune system cells.  Immune cells also manufacture these same chemicals.

Immune cells are everywhere in the body.  Brain-based phenomena such as depression impact the function of the immune system such that our level of disease resistance rises and falls with our moods.  In at least chemical terms, these cells are operating in conjunction with our neural network.  Pert’s results reveal that through the immune system, our minds occupy the full sensory space of our bodies, and are not limited to our brains.  By the same route, immune cells convey the chemical implications of our emotional state into every cell in our body.  This means that the way we think has a direct impact on our health.

Adaptive immune cells recognise stress signals, neurotransmitters, and foreign proteins.  Foreign antigen recognition activates the immunological synapse, and triggers the adaptive immune response.  Recent research has shown that the MHC proteins, essential for this response, are also involved in the functioning of nerve synapses in the brain.  This implies that the two systems are really both part of the same ‘neural super-organ’.

This ‘organ’ has flexibility as to where it focusses its attention.  Release of cytokines and other stress signals draw immune cells into tissues where their surveillance is most required.  This roving internal sense organ has been referred to by Enzo Ottavani and Claudio Franceschi as an ‘immune-mobile brain’ whose ‘eyes and ears’ are our adaptive immune cells.

Poster, emphasising the importance of surveillance, issued by the office for Emergency Management in the United Kingdom during the Second World War (Image: Wikimedia Commons)

Poster, emphasising the importance of surveillance, issued by the office for Emergency Management in the United Kingdom during the Second World War (Image: Wikimedia Commons)

 

This surveillance system cross-reacts with and can mutually influence the body’s hormonal system and gut microbiome.  Edwin Blalock has suggests a primary role for the immune system as a sense organ; truly our ‘sixth sense’, which is able to detect stimuli not recognised by the central or peripheral nervous system.  This information, the chemical language of the body’s bacterial community, is translated into a cognitively accessible form by the antennae of the adaptive immune system.

This provides a picture of the brain and immune system as forming an integrated ‘body-mind’.  This system’s sensory perceptions, thoughts, emotions and behavioural responses impact the physical body at the biochemical level.  This ‘embodiment’ idea has also become apparent through recent insights into the actions of mirror neurons and the neural basis of human language.

Having a conversation in the same language synchronises our minds.  The brain and immune system translate this into hormonal and other chemical cues of emotion.

This suggests that our immune system is one part – a subconscious part – of our overall consciousness. This consciousness  is integrated into our ‘body-mind’.  Through sharing our thoughts with others, our awareness operates beyond the body at a higher level, and as we do this, we connect at the level of our chemistry.

Conclusions

  • Innate immunity is general, and present in all cells in some form, from bacteria to humans.
  • Adaptive immunity, where the organism raises a specifically cross-reacting chemical response to an infection, has evolved multiple times in multicellular life forms, including twice in vertebrates. Characteristics of adaptive immune systems in vertebrates are the appearance of cross-reacting proteins (antibodies) produced by specialised immune cells, a self-identifier (the major histocompatibility complex) in all body cells, and a thymus gland, which is a new organ within the lymphatic system.
  • The driver of immune system evolution in vertebrates is not primarily defence. Factors that have driven the evolution of immune complexity in the vertebrate system (relative to invertebrates) may include (i) evolutionary ‘arms races’ with gut parasites, and (ii) an increased need to monitor the metabolic by-products of the higher energy vertebrate body.
  • Immune complexity seems to be linked to the complexity of the overall organism, and fulfils a self-surveillance role. The increased complexity of vertebrate systems has in fact made them vulnerable to a wider range of infections than invertebrates.
  • Vertebrate immune cells, neurons, and body cells all share a common chemical language; a language also used by the associated microbes that live on and around the vertebrate body (the microbiota).
  • Immune cells form synapses, using a similar between-cell communication apparatus that neurons use to form their synapses. However the immune synapses are more transient, and this component of the body’s relay network is able to migrate to tissues where it is needed, augmenting the body’s surveillance in this area.
  • Brain-body communication is two-way.  The immune system integrates our thoughts and emotional state with our body, as well as informing the mind of the status of the body’s cells and tissues.

Text copyright © 2015 Mags Leighton. All rights reserved.

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